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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015864461.1_cds_XP_016516007.1_28292
CDS Infomation

[gene=LOC107832658] [db_xref=GeneID:107832658] [protein=vicilin-like antimicrobial peptides 2-1] [protein_id=XP_016516007.1] [location=join(145029..145356,145461..145636,148145..148225,148345..148602,148765..149041,149209..149411)] [gbkey=CDS]
Sequence

ATGAGCTTCCATCACAGTTCAAAATTCATAACTATGGCAATTTTCACTAAACCAAAGCTC
TTATTTCTCTTCTTCTTGATCCTCTCAATCTTTCTTTCTTCTCAATGTGATGAAGAAGAG
AACAATCCCTACTTATTTGAGTCACAGAGGTTCAGATCTCGATTTAAATCAAAACATGGT
GAATTTCGAGTCCTTGAGAAATTCACTGAAAGATCTGAACTTCTTGGAGGACTAGAGAAG
TATGGAGTTGCAGTCCTTGAATTTGAACCTCTGTCTTTCATGTTTCCTCATCACTGTGAT
GCTGAAATCATACTTTTTGTTGTTAGAGGAAGAGGAACAATAAGTATAGCGGAACAAGAA
GAGAAGAACTCCTTCAACTTGGAAAATGGAGATGTAATCAGAGTGAATGCTGGTTCAACA
ATCTACATGATCAACAGGAATAACAATGAAAGGTTCTTTGTTTACGTGCTAGCCAAGACC
GTTCATATTCCTGGCCAATTTCAGGAATATTTTAGTGGTGGAGGTGAAAATCCAGAATCC
TTCTACAGAGCTTTCAGCAGTGAGATTCTGGAGACTGCTTTCAATATCCCAAGGGACACG
ATAGAGGGGCTATTTGGACAACAAAGAAAGGGAATATTTGTCAAAGCCTCTGAAGAGCAA
ATTAGAGCAATAAGCGAACACGCTTCACGCTCCACTAAGCAACAAACTAGAGGTCCTTTC
AATCTATTGAATGAACGCCCATTACTTGGAAACAGATTTGGACAGTACTTTGAAGCAACC
CCAGAGAGATTCGAACAGTTGAGGGATTTGGATGCTGCTGCTGGTATCATGAACATAAAC
CAAGGTGGAATGTTATTACCAGTCTACTGTACAAGGACAACATGGTTTGTCATGGTTGTA
GAAGGAAATGGGCGCTTTGAAATGGCATGCCCTCATCTTGGTAGCCAAAGCCAGAGACAG
GGGCGCCACTACCAGAAAGTCCAAGGTTCTCTATCAGTTGGTGATGTTCTGATAATTCGT
GCAGGCCATCCTATTACCGTTGTAGCCACCGGGGATTCAGATCTCAGAATGGTTGGTATT
GGATTCAATGCTCATAACAACAGAATGAACTTCCTTGCAGGTCGACAAAGCATATGGAGA
AATATAGACAGAGAAGCAAAAGAAGTGTCATTCAACATGCCAGCAAGGGAGGTGGAAGAA
ATCTTGCAGAAGCAAGATCAGTCCTATTTTGTGGCAGGACCAGAGCAGCGACAGCAACAG
ATGAGGGAAGAAGCAACAAGGGAACGACAATATGTTTCTTCAAGTTTGGACTTCGTTTTC
TAA

Peptide Sequence

PEP ID

XP_016516007.1
PEP Infomation

PREDICTED: vicilin-like antimicrobial peptides 2-1 [Nicotiana tabacum]
Sequence

MSFHHSSKFITMAIFTKPKLLFLFFLILSIFLSSQCDEEENNPYLFESQRFRSRFKSKHG
EFRVLEKFTERSELLGGLEKYGVAVLEFEPLSFMFPHHCDAEIILFVVRGRGTISIAEQE
EKNSFNLENGDVIRVNAGSTIYMINRNNNERFFVYVLAKTVHIPGQFQEYFSGGGENPES
FYRAFSSEILETAFNIPRDTIEGLFGQQRKGIFVKASEEQIRAISEHASRSTKQQTRGPF
NLLNERPLLGNRFGQYFEATPERFEQLRDLDAAAGIMNINQGGMLLPVYCTRTTWFVMVV
EGNGRFEMACPHLGSQSQRQGRHYQKVQGSLSVGDVLIIRAGHPITVVATGDSDLRMVGI
GFNAHNNRMNFLAGRQSIWRNIDREAKEVSFNMPAREVEEILQKQDQSYFVAGPEQRQQQ
MREEATRERQYVSSSLDFVF

Transcript Sequence

Gene sequence data has not been registered.